The single-cell and spatial transcriptional landscape of human gastrulation and early brain development
Bo Zeng, Zeyuan Liu, Yufeng Lu, Suijuan Zhong, Shenyue, Luwei Huang, Yang Zeng, Zixiao Li, Hao Dong, Yingchao Shi, Jialei Yang, Yalun Dai, Qiang Ma, Le Sun, Lihong Bian, Dan Han, Youqiao Chen, Xin Qiu, Wei Wang, Oscar Marín, Qian Wu, Yongjun Wang, Xiaoqun Wang
Abstract
The emergence of the three germ layers and the lineage-specific precursor cells orchestrating organogenesis represent fundamental milestones during early embryonic development. We analyzed the transcriptional profiles of over 400,000 cells from 14 human samples collected from post-conceptional weeks (PCW) 3 to 12 to delineate the dynamic molecular and cellular landscape of early gastrulation and nervous system development. We described the diversification of cell types, the spatial patterning of neural tube cells, and the signaling pathways likely involved in transforming epiblast cells into neuroepithelial cells and then into radial glia. We resolved 24 clusters of radial glial cells along the neural tube and outlined differentiation trajectories for the main classes of neurons. Lastly, we identified conserved and distinctive features across species by comparing early embryonic single-cell transcriptomic profiles between humans and mice. This comprehensive atlas sheds light on the molecular mechanisms underlying gastrulation and early human brain development.
附件下载：
The single-cell and spatial transcriptional landscape of human gastrulation and early brain development, Cell Stem Cell, 15 May 2023
Cell Stem Cell, 15 May, 2023, DOI：https://doi.org/10.1016/j.stem.2023.04.016
The single-cell and spatial transcriptional landscape of human gastrulation and early brain development
Bo Zeng, Zeyuan Liu, Yufeng Lu, Suijuan Zhong, Shenyue, Luwei Huang, Yang Zeng, Zixiao Li, Hao Dong, Yingchao Shi, Jialei Yang, Yalun Dai, Qiang Ma, Le Sun, Lihong Bian, Dan Han, Youqiao Chen, Xin Qiu, Wei Wang, Oscar Marín, Qian Wu, Yongjun Wang, Xiaoqun Wang
Abstract
The emergence of the three germ layers and the lineage-specific precursor cells orchestrating organogenesis represent fundamental milestones during early embryonic development. We analyzed the transcriptional profiles of over 400,000 cells from 14 human samples collected from post-conceptional weeks (PCW) 3 to 12 to delineate the dynamic molecular and cellular landscape of early gastrulation and nervous system development. We described the diversification of cell types, the spatial patterning of neural tube cells, and the signaling pathways likely involved in transforming epiblast cells into neuroepithelial cells and then into radial glia. We resolved 24 clusters of radial glial cells along the neural tube and outlined differentiation trajectories for the main classes of neurons. Lastly, we identified conserved and distinctive features across species by comparing early embryonic single-cell transcriptomic profiles between humans and mice. This comprehensive atlas sheds light on the molecular mechanisms underlying gastrulation and early human brain development.
文章链接：https://www.sciencedirect.com/science/article/pii/S1934590923001340?via%3Dihub